PředmětyPředměty(verze: 970)
Předmět, akademický rok 2024/2025
   Přihlásit přes CAS
Medical Chemistry and Biochemistry - B83120 (Všeobecné lékařství - AP)
Anglický název: Medical Chemistry and Biochemistry
Zajišťuje: Ústav lékařské biochemie a laboratorní diagnostiky 1. LF UK a VFN (11-00410)
Fakulta: 1. lékařská fakulta
Platnost: od 2024 do 2024
Semestr: zimní
Body: 14
E-Kredity: 14
Způsob provedení zkoušky: zimní s.:
letní s.:
Rozsah, examinace: zimní s.:4/5, Z [HT]
letní s.:4/5, Z+Zk [HT]
Rozsah za akademický rok: 270 [hodiny]
Počet míst: neomezen
Minimální obsazenost: neomezen
4EU+: ne
Virtuální mobilita / počet míst pro virtuální mobilitu: ne
Stav předmětu: vyučován
Jazyk výuky: angličtina
Způsob výuky: prezenční
Vysvětlení: dr.Platenik (ULBLD) jplat@lf1.cuni.cz, Dr.Ševčík(UBEO) jsevc@lf1.cuni.czfor info see web pages of institute
Další informace: http://ulbld.lf1.cuni.cz, http://ubeo.lf1.cuni.cz
Staré označení: 606
Poznámka: nutno dodat lékařské potvrzení
povolen pro zápis po webu
Garant: prof. MUDr. Tomáš Zima, DrSc., MBA
Atributy: Lékařství
Předmět pro elearning
Teoretický předmět
Prerekvizity : {Anatomie pro ALEK jako rekvizita}, {Obecná histologie pro ALEK jako prerekvizita}
Korekvizity : B80003
Záměnnost : B81604
Je prerekvizitou pro: B80632, B80634, B82431, B82433, B82432, B83161, B83162, B82925, B83164
Podmínky zakončení předmětu - angličtina

The final examination on Medical Chemistry and Biochemistry consists of two parts: written and oral. At least 57% of obtainable points must be reached in the written test in order to proceed to the oral part of the final examination. This requirement shall not be applied in case of the third exam attempt. Students who pass the written test but fail in the oral part will not write the test again in the subsequent exam attempts. If a student fails to answer a partial question at the exam, it is sufficient as a cause for termination of examination and classification of the whole exam as ‘failed’.    

A student can take an examination in a subject for three times as a maximum, i.e. the student is entitled to two re-examinations, and no extraordinary terms beyond that are allowed. In case of the second re-examination in a mandatory or elective subject the student is examined by a committee consisting of at least two examiners. If the internal faculty regulations (Article 19, Paragraph 2), permit repeated registration for the subject, the examination by the committee shall be applied only to the second re-examination in case of the repeatedly registered subject. By this a right of the faculty to enable examination by the committee in other cases, if implied by the internal regulations (Article 19, Paragraph 2), is not affected.

The credit requirements and further information on the examinations can be found in the announcements on the website of biochemical institute that provides the classes in the given academic year.

Poslední úprava: Pláteník Jan, MUDr., Ph.D. (12.01.2021)
Literatura

H.S. Stoker: General, Organic and Biological Chemistry. Houghton Mifflin Co., Boston, (latest edition).

P.C. Champe, R.A. Harvey, and D.R. Ferrier: Lippincott?s Illustrated Reviews: Biochemistry. Lippincott Williams & Wilkins (latest edition)

R.K. Murray et al.: Harper?s Illustrated Biochemistry. McGraw-Hill, Inc., USA (latest edition)

B. Alberts et al.: Essential Cell Biology. Garland Science Publishing, New York (latest edition)

J.M. Gerg, J.L. Tymoczko, L. Stryer: Biochemistry. Freeman, New York (latest edition).

Poslední úprava: Kohútová Vladislava, Ing. (07.01.2019)
Požadavky ke zkoušce - angličtina

MEDICAL CHEMISTRY AND BIOCHEMISTRY

Exam Questions 

I. Physical, inorganic and organic chemistry

1.      Types of chemical bonds, weak interactions.

2.      Water and its physical and chemical properties, significance in organism.

3.      Dispersion systems, solubility of substances, true and colloid solutions, emulsion and suspension.

4.      Diffusion, osmosis, osmotic and oncotic pressure, dialysis, examples from biochemistry.

5.      Energetics of chemical reactions, Gibbs energy and entropy, application to metabolic processes.

6.      Chemical equilibrium, Guldberg-Waage law. Kinetics and energetics of reversible reactions, application in enzymology.

7.      Basic techniques for separation of macromolecules (electrophoresis, chromatography, salting out) and their usage in clinical practice.

8.      Spectrophotometry, principle and use in clinical biochemistry.

9.      Electrolytic dissociation, dissociation constant, strong and weak electrolytes, examples from biochemistry.

10.  Brönsted-Lowry theory of acids and bases, equilibrium in protolytic reactions, examples from biochemistry.

11.  Autoionization of water, pH and its significance in medicine.

12.  Ampholytes, their properties, examples from biochemistry.

13.  Buffers, calculation of buffer pH, significance in organism.

14.  Oxidation and reduction, redox potential, dependence on concentration of reactants, examples from biochemistry. Coenzymes of oxidation-reduction reactions.

15.  Precipitation reactions, solubility product, formation of complexes, coordination compounds, examples and significance in biochemistry and medicine.

16.  Chemical properties of main biogenic elements.

17.  Oxygen and its inorganic compounds, reactivity, properties.

18.  Lipid peroxidation.

19.  Toxicologically significant elements, mechanism of action of selected toxic compounds (CO, KCN, HCN, H2S, heavy metals).

20.  Biologic and metabolic significance of trace elements.

21.  Structure of organic compounds, isomerism, examples from metabolic pathways.

22.  Halogen- and nitroderivatives of hydrocarbons, examples of toxicologically and medically significant compounds.

23.  Sulfur derivatives of hydrocarbons, examples of medically significant compounds.

24.  Amines, significance in biochemistry.

25.  Alcohols, phenols, aldehydes and ketones, roles in metabolism. Substances used as disinfectants, mechanism of their action.

26.  Carboxylic acids, functional and substitution derivatives of carboxylic acids, use in biochemistry.

27.  Nitrogen, oxygen and sulfur heterocycles, significance.

28.  Structural features of amino acids, classification, reactions, significance.

29.  Peptides, peptide bond, examples of biologically important peptides.

30.    Proteins, primary, secondary, tertiary and quaternary structure. Suprasecondary structures (motifs), protein domains. Protein misfolding. Properties and functions of proteins.

31.  Saccharides, classification, structure, stereochemistry, biological significance.

32.  Reactions and derivatives of monosaccharides, disaccharides, O- and N- glycosidic bond, examples.

33.  Homopolysaccharides and heteropolysaccharides, structure, occurrence and significance in the organism.

34.  Proteoglycans, glycoproteins, structure, properties, examples.

35.  Lipids – classification, structure, properties, function in the organism.

36.  Fatty acids.

37.  Phospholipids and sphingolipids, structure, properties and significance.

38.  Sterols, bile acids and steroid hormones, structure, function and significance in the organism.

II. Metabolism

1.      Structure of enzymes (simple and conjugated; apoenzyme and holoenzyme; cofactors: coenzymes, prosthetic groups, coactivators; oligomeric structure); multiple enzyme forms and isoenzymes. Classification of enzymes. Examples, significance.

2.      Enzyme activity and its measurement, physico-chemical influences, regulation (expression, covalent modifications, allosteric effects). Use of enzymology in medicine.

3.      Energetics of enzyme catalysis. Kinetics of monomeric and oligomeric enzymes, examples. Km, kcat, catalytic efficiency of enzymes.

4.      Inhibition of enzymes: competitive, non-competitive, covalent, allosteric. Use of enzyme inhibitors in medicine.

5.      The respiratory chain. Oxidative phosphorylation. Substrate shuttles for transport of electrons across mitochondrial membranes.

6.      “Macroergic” compounds, substrate level phosphorylation; driving endergonic reactions.

7.      Citric acid cycle, amphibolic character, course, regulation.

8.      General mechanisms of amino acid conversions, deamination, transamination, decarboxylation. Nitrogen balance.

9.      Metabolism of one-carbon residues. Sources and utilization of one-carbon residues, cofactors.

10.  Production of ammonia, its detoxication, ureosynthetic cycle and its regulation, hyperammonemia.

11.  Metabolism of amino acids of the pyruvate and oxaloacetate groups, participation of these amino acids in metabolic processes.

12.  Metabolism of carbon skeleton of amino acids of the 2-oxoglutarate group and branched-chain amino acids, participation of these amino acids in metabolic processes.

13.  Catabolism of aromatic amino acids, disorders.

14.  Metabolism of sulfur amino acids.

15.  Biosynthesis, biodegradation and function of the most significant biogenic amines.

16.  Conversion of amino acids to specialized products: creatine, S-adenosylmethionine, carnitine, taurine, their significance.

17.  Glycolysis, energetic yield, utilization by various body organs at different physiological conditions, regulations, oxidation of pyruvate, pyruvate dehydrogenase complex.

18.  Gluconeogenesis, significance, regulation.

19.  Synthesis and degradation of glycogen, significance, regulation, disorders.

20.  Pentose phosphate cycle, regulation.

21.  Metabolism of galactose and fructose, disorders.

22.  Metabolism of glucuronic acid and its significance in the organism.

23.  Biosynthesis of fatty acids.

24.  Formation of ketone bodies from acetyl-CoA, metabolic causes, significance.

25.  Oxidation of fatty acids, energetic yield, carnitine system.

26.  Triacylglycerols, biosynthesis, degradation.

27.  Biosynthesis and degradation of phospholipids (glycerophospholipids and sphingolipids).

28.  Biosynthesis of prostaglandins, thromboxanes and leukotrienes.

29.  Biosynthesis of cholesterol and its regulation, role of HMG-CoA reductase and SREBP protein.

30.  Conversion and excretion of cholesterol, biosynthesis of bile acids and its regulation.

31.  Biosynthesis and degradation of steroid hormones.

32.  Transport of lipids, roles of lipoproteins, structure of lipoprotein particles. Electrophoresis of lipoproteins.

33.  Transport of endogenous and exogenous cholesterol (origin, conversion and role of chylomicrons, VLDL, LDL and HDL lipoproteins).

34.  Biosynthesis of tetrapyrroles – heme, and its disorders. Incorporation of heme into apoproteins and its function.

35.  Degradation of tetrapyrroles – heme, and its disorders. Intravascular and extravascular decomposition of erythrocytes.

36.  Metabolism of purine nucleotides, regulation, inhibitors, disorders.

37.  Metabolism of pyrimidine nucleotides, regulation, inhibitors, disorders.

38.  Reactive oxygen species, origin and significance, antioxidants.

III. Biochemistry of organs and functions

1.      Biochemical interrelationships between metabolism of saccharides and other nutrients.

2.      Glycemia, regulation, diagnostics (oGTT, glycated hemoglobin).

3.      Metabolism of adipose tissue.

4.      Regulation of heme biosynthesis, differences between hepatocyte and erythroid cell, metabolism of iron.

5.      Mechanism of action of hormones regulating water and mineral metabolism.

6.      Hormonal regulation of energetic metabolism.

7.      Biochemical processes in digestion of saccharides, lipids and proteins.

8.      Biochemical functions of the hepatocyte and liver, possibilities of biochemical diagnostics of hepatocyte damage and liver functions.

9.      Biotransformation of endogenous and exogenous substances, types of biotransformation processes, toxic and cancerogenic substances in the environment.

10.  Buffering systems in the organism, function and significance for acid-base balance.

11.  Metabolism of erythrocytes.

12.  Important proteins of blood plasma, importance in the organism (albumin, Ig, acute phase proteins, transport proteins).

13.  Blood coagulation, cascade of coagulation factors, initiation, amplification and propagation, tenase and prothrombinase complexes. Role of thrombocytes and vitamin K.

14.  Fibrin, fibrinolysis. Mechanism of action of anticoagulants.

15.  Urine – physiological and pathological components.

16.  Extracellular matrix, extracellular polysaccharides and proteins (collagen, elastin) – structure, properties, function. Metabolism of collagen.

17.  Biochemistry of connective tissue (cartilage, bone).

18.  Biochemistry of the skin (barrier function, vitamin D, cytokeratins, cell junctions, biosynthesis of melanin).

19.  Contractile apparatus, control of smooth muscle and striated muscle contraction.

20.  Markers of muscle damage, significance, determination.

21.  Biochemistry of vision, Wald cycle, transducin cycle.

22.  Biochemistry of senses (taste, smell).

23.  Biochemistry of nervous synapses, neurotransmitters.

24.  Catecholamines – biosynthesis, biodegradation.

25.  Steroid hormones – structure of receptors for steroid hormones, mechanism of action, functions.

26.  Peptidic hormones – mechanisms of action, functions.

27.  Local mediators (cytokines, growth factors, chemokines) – functions, mechanism of action.

28.  Hormones of the thyroid gland and their function in regulatory processes.

29.  Structure and function of the individual parts of the immunoglobulin molecules. Classes of immunoglobulins, properties and function. Monoclonal antibodies – preparation and use.

30.  Molecular basis of immunoglobulin diversity in the primary and secondary antibody response, somatic recombination, isotype switching.

31.  Molecular foundations of cellular immunity – pathogen recognition by cells of specific and innate immunity, effector mechanisms. MHC molecules – structure, function, mechanisms of antigen presentation to Tc and TH lymphocytes.

32.  Basic immunochemical techniques. Immunoturbidimetry, ELISA, RIA.

33.  Biochemical significance of fat-soluble vitamins.

34.  Biochemical significance of water-soluble vitamins, cofactors derived from these vitamins.

35.  Structure, composition and properties of cellular membranes.

36.  Transport of substances across membranes.

37.  Cytoskeleton.

38.  Compartmentation of biochemical processes at the subcellular level.

IV. Cellular and molecular biology

1.      Principles, mechanisms and significance of intercellular communication and intracellular signal transduction cascades.

2.      Types of membrane receptors, their ligands, biological significance, examples.

3.      Intracellular receptors, heat-shock proteins, interactions of receptors with DNA.

4.      Amplification, integration and cross-talk of signaling pathways.

5.      G-proteins – structure, activation, function.

6.      Types and role of second messengers in signal transduction.

7.      Mechanism and significance of reversible phosphorylation in signal transduction.

8.      Signaling stimulated by growth factors (MAPK, PKB/AKT) and cytokines (JAK-STAT).

9.      Signaling pathways dependent on regulated proteolysis, examples. Signaling role of HIF in response to hypoxia.

10.  Signaling of NO, medical significance.

11.  Structure and function of DNA.

12.  Structure and function of RNA.

13.  Organization of prokaryotic, eukaryotic and mitochondrial genome.

14.  Techniques of DNA sequencing (Sanger, NGS, human genome sequencing).

15.  Classification of human genomic DNA according to repetitiveness and according to function, pseudogenes, transposons.

16.  Replication of eukaryotic DNA, replication machinery and its regulation.

17.  DNA repair – BER, NER, MMR, direct repair of modified bases.

18.  DNA repair – HR, NHEJ.

19.  Transcription of prokaryotic and eukaryotic genomic DNA. Transcription factors, interaction DNA-protein.

20.  Structure of mRNA, post-transcriptional modification (capping, poly(A), splicing).

21.  RNA interference, types and functions of non-coding RNA.

22.  Regulation of gene expression at the transcription level.

23.  Genetic code and its properties.

24.  Eukaryotic and prokaryotic translation. Regulation of translation.

25.  Protein sorting and targeting. Post-translational protein modifications.

26.  Biosynthesis of glycoproteins, their significance.

27.  Vesicular transport. Endocytosis and exocytosis.

28.  Restriction enzymes and other tools of genetic engineering, construction of recombinant molecules of DNA and proteins. DNA cloning.

29.  Methods of cell fractionation, electrophoresis of nucleic acids and proteins.

30.  Polymerase chain reaction, use of PCR in clinical diagnostics, RT-PCR and use of this technique.

31.  Nature of gene mutations, inherited and acquired mutations, polymorphisms, mini- and microsatellite sequences and their uses.

32.  DNA and RNA viruses – structure and replication.

33.  Proto-oncogenes.

34.  Tumor suppressor genes.

35.  Cell cycle, role of cyclins and cdk (cyclin-dependent kinase) complexes.

36.  Lysosomal and proteosomal degradation of cellular proteins. Ubiquitination of proteins.

37.  Biochemistry of apoptosis, examples of pro- and anti-apoptotic genes/proteins. Caspases. Role of mitochondria in cell death.

38.  Epigenetics, modification of histones, DNA methylation, significance.

 

Poslední úprava: Pláteník Jan, MUDr., Ph.D. (24.10.2024)
Sylabus - angličtina

Introduction to physical, inorganic, and organic chemistry - principles of chemical processes, structures and characteristics of substances that are present in the human body under physiological and pathological conditions and general principles of their metabolism, basics of the metabolism of xenobiotics.

Overview of metabolic pathways - turnover of body fuels, interplay of their metabolic pathways during production, storage, and interconversion of energy and synthesis and degradation of structural and informational molecules.

Molecular biology principles of body functions - dynamics of information molecules, intracellular, intercellular, and systemic mechanisms of metabolic regulations, illustrative examples from the biochemistry of organ systems and molecular defects leading to human diseases.

Concepts of bioanalytical approaches - methods for the detection of biochemical and molecular biology markers in human medicine

Poslední úprava: Kolářová Jana (04.10.2019)
Rozpis výuky -
Rozpis blokový
Týden bloku Den Od - Do Typ výuky Téma Učitel Soubory Poznámka Hodnocení
1Pondělí14:15 - 17:15praktická cvičeníIntroduction to work in chemical laboratory. Safety rules. Measuring volumes, centrifugation, filtration, dissolution, separation of substances form mixtures. Groups 2055 2056
14:15 - 15:45seminářCalculations 1: Ionic equations, solutions, stoichiometryMUDr. Jan Pláteník, Ph.D. 
Úterý14:15 - 15:45seminářCalculations 1: Ionic equations, solutions, stoichiometryMUDr. Jan Pláteník, Ph.D. 
Středa14:15 - 17:15praktická cvičeníIntroduction to work in chemical laboratory. Safety rules. Measuring volumes, centrifugation, filtration, dissolution, separation of substances form mixtures. Groups 2051, 2052
Čtvrtek14:15 - 17:15praktická cvičeníIntroduction to work in chemical laboratory. Safety rules. Measuring volumes, centrifugation, filtration, dissolution, separation of substances form mixtures. Groups 2053, 2054
Pátek14:15 - 15:45seminářCalculations 1: Ionic equations, solutions, stoichiometryMUDr. Jan Pláteník, Ph.D. 
2Pondělí14:15 - 15:45seminářCalculations 2: pH of acids and bases, osmolarityMUDr. Jan Pláteník, Ph.D. 
14:15 - 17:15praktická cvičeníQualitative and quantitative analysis in inorganic chemistry: Reactions of cations and anions. Titrations.Groups 2055, 2056
Úterý14:15 - 15:45seminářCalculations 2: pH of acids and bases, osmolarityMUDr. Jan Pláteník, Ph.D. 
Středa14:15 - 17:15praktická cvičeníQualitative and quantitative analysis in inorganic chemistry: Reactions of cations and anions. Titrations.Groups 2051, 2052
Čtvrtek14:15 - 17:15praktická cvičeníQualitative and quantitative analysis in inorganic chemistry: Reactions of cations and anions. Titrations.Groups 2053 2054
Pátek14:15 - 15:45seminářCalculations 2: pH of acids and bases, osmolarityMUDr. Jan Pláteník, Ph.D. 
3Pondělí14:15 - 15:45seminářCalculations 3: BuffersMgr. Libuše Nosková, Ph.D. 
14:15 - 17:15praktická cvičeníSpectrophotometry in biochemistry.Groups 2055, 2056
Úterý14:15 - 15:45seminářCalculations 3: BuffersMgr. Libuše Nosková, Ph.D. 
Středa14:15 - 17:15praktická cvičeníSpectrophotometry in biochemistry.Groups 2051, 2052
Čtvrtek14:15 - 17:15praktická cvičeníSpectrophotometry in biochemistry.Groups 2053, 2054
Pátek14:15 - 15:45seminářCalculations 3: BuffersMgr. Libuše Nosková, Ph.D. 
4Pondělí14:15 - 17:15praktická cvičeníBuffers, buffer capacity. Oxidation and Reduction. Electrode processes.Groups 2055, 2056
průměr: 1, hodnoceno: 1x
14:15 - 15:45seminářSimilarities of organic and biochemical reactionsMUDr. Adriana Rybnikářová 
Úterý14:15 - 15:45seminářSimilarities of organic and biochemical reactionsMUDr. Adriana Rybnikářová 
Středa14:15 - 17:15praktická cvičeníBuffers, buffer capacity. Oxidation and Reduction. Electrode processes.Groups 2051, 2052
Čtvrtek14:15 - 17:15praktická cvičeníBuffers, buffer capacity. Oxidation and Reduction. Electrode processes.Groups 2053, 2054
Pátek14:15 - 15:45seminářSimilarities of organic and biochemical reactions 
5Pondělí14:15 - 15:45seminářModels of (bio)organic compounds. Chirality of amino acids. Ing. Iva Subhanová, Ph.D. 
14:15 - 17:15praktická cvičeníTUTORIAL 1: Calculations, organic chemistry.Groups 2055, 2056
Úterý14:15 - 15:45seminářModels of (bio)organic compounds. Chirality of amino acids. Ing. Iva Subhanová, Ph.D. 
Středa14:15 - 17:15praktická cvičeníTUTORIAL 1: Calculations, organic chemistry.Groups 2051, 2052
Čtvrtek14:15 - 17:15praktická cvičeníTUTORIAL 1: Calculations, organic chemistry.Groups 2053, 2054
Pátek14:15 - 15:45seminářModels of (bio)organic compounds. Chirality of amino acids. Ing. Iva Subhanová, Ph.D. 
6Pondělí14:15 - 15:45seminářTEST 1: Calculations, organic chemistry.Group teachers
14:15 - 17:15praktická cvičeníBasic organic reactions. Properties of proteins. Electrophoresis.Groups 2055, 2056
Úterý14:15 - 15:45seminářTEST 1: Calculations, organic chemistry.Group teachers
Středa14:15 - 17:15praktická cvičeníBasic organic reactions. Properties of proteins. Electrophoresis.Groups 2051, 2052
Čtvrtek14:15 - 17:15praktická cvičeníBasic organic reactions. Properties of proteins. Electrophoresis.Groups 2053, 2054
Pátek14:15 - 15:45seminářTEST 1: Calculations, organic chemistry.Group teachers
7Pondělí14:15 - 15:45seminářStructure of proteins.doc. MUDr. Lucie Muchová, Ph.D. 
14:15 - 17:15praktická cvičeníSeparation techniques: Thin-layer chromatography, gel filtration, dialysis.Groups 2055, 2056
Úterý14:15 - 15:45seminářStructure of proteins.doc. MUDr. Lucie Muchová, Ph.D. 
Středa14:15 - 17:15praktická cvičeníSeparation techniques: Thin-layer chromatography, gel filtration, dialysis.Groups 2051, 2052
Čtvrtek14:15 - 17:15praktická cvičeníNational Holiday.Groups 2053, 2054
Pátek14:15 - 15:45seminářStructure of proteins.doc. MUDr. Lucie Muchová, Ph.D. 
8Pondělí14:15 - 15:45seminářEnzyme kinetics.Mgr. Jan Ševčík, Ph.D. 
14:15 - 17:15praktická cvičeníSelected reactions of saccharides. Biochemical examination of diabetes mellitus.Groups 2055, 2056
Úterý14:15 - 15:45seminářEnzyme kinetics.Mgr. Jan Ševčík, Ph.D. 
Středa14:15 - 17:15praktická cvičeníSelected reactions of saccharides. Biochemical examination of diabetes mellitus.Groups 2051, 2052
Čtvrtek14:15 - 17:15praktická cvičeníSelected reactions of saccharides. Biochemical examination of diabetes mellitus.Groups 2053, 2054
Pátek14:15 - 15:45seminářEnzyme kinetics.Mgr. Jan Ševčík, Ph.D. 
9Pondělí14:15 - 17:15praktická cvičeníSpecificity of enzymes, effects of temperature and pH on enzyme activity. Enzyme kinetics. Redox enzymesGroups 2055, 2056
14:15 - 15:45seminářStereochemistry of saccharides. Basic reactions of saccharides.RNDr. Marek Vecka, Ph.D. 
Úterý14:15 - 15:45seminářStereochemistry of saccharides. Basic reactions of saccharides.RNDr. Marek Vecka, Ph.D. 
Středa14:15 - 17:15praktická cvičeníSpecificity of enzymes, effects of temperature and pH on enzyme activity. Enzyme kinetics. Redox enzymesGroups 2051, 2052
Čtvrtek14:15 - 17:15praktická cvičeníSpecificity of enzymes, effects of temperature and pH on enzyme activity. Enzyme kinetics. Redox enzymesGroups 2053, 2054
Pátek14:15 - 15:45seminářStereochemistry of saccharides. Basic reactions of saccharides.RNDr. Marek Vecka, Ph.D. 
10Pondělí14:15 - 17:15seminářStructure and basic reactions of lipidsRNDr. Marek Vecka, Ph.D. 
14:15 - 17:15praktická cvičeníTUTORIAL 2: Enzymes, oxidative phosphorylation, citric acid cycle, saccharides.Groups 2055, 2056
Úterý14:15 - 17:15seminářStructure and basic reactions of lipidsRNDr. Marek Vecka, Ph.D. 
Středa14:15 - 17:15praktická cvičeníTUTORIAL 2: Enzymes, oxidative phosphorylation, citric acid cycle, saccharides.Groups 2051, 2052
Čtvrtek14:15 - 17:15praktická cvičeníTUTORIAL 2: Enzymes, oxidative phosphorylation, citric acid cycle, saccharides.Groups 2053, 2054
Pátek14:15 - 17:15seminářStructure and basic reactions of lipidsRNDr. Marek Vecka, Ph.D. 
11Pondělí14:15 - 15:45seminářTransport of lipids. Lipoproteins.RNDr. Marek Vecka, Ph.D. 
14:15 - 17:15praktická cvičeníReactions of lipids. Digestion of lipids. Biochemical examination of lipid metabolism.Groups 2055, 2056
Úterý14:15 - 15:45seminářTransport of lipids. Lipoproteins.RNDr. Marek Vecka, Ph.D. 
Středa14:15 - 17:15praktická cvičeníReactions of lipids. Digestion of lipids. Biochemical examination of lipid metabolism.Groups 2051, 2052
Čtvrtek14:15 - 17:15praktická cvičeníReactions of lipids. Digestion of lipids. Biochemical examination of lipid metabolism.Groups 2053, 2054
Pátek14:15 - 15:45seminářTransport of lipids. Lipoproteins.RNDr. Marek Vecka, Ph.D. 
12Pondělí14:15 - 17:15praktická cvičeníMetabolism of amino acids. Nitrogen balance.Groups 2055, 2056
Středa14:15 - 17:15praktická cvičeníMetabolism of amino acids. Nitrogen balance.Groups 2051, 2052
Čtvrtek14:15 - 17:15praktická cvičeníMetabolism of amino acids. Nitrogen balance.Groups 2053, 2054
13Pondělí14:15 - 17:15seminářSelected immunochemical methods.Mgr. Libuše Nosková, Ph.D. 
14:15 - 15:45praktická cvičeníTUTORIAL 3: Amino acids, lipids, conections among metabolic pathways 
Úterý14:15 - 17:15seminářSelected immunochemical methods.Mgr. Libuše Nosková, Ph.D. 
Středa14:15 - 15:45praktická cvičeníTUTORIAL 3: Amino acids, lipids, conections among metabolic pathways 
Čtvrtek14:15 - 15:45praktická cvičeníTUTORIAL 3: Amino acids, lipids, conections among metabolic pathways 
Pátek14:15 - 17:15seminářSelected immunochemical methods.Mgr. Libuše Nosková, Ph.D. 
14Pondělí14:15 - 17:15praktická cvičeníImunochemical methods. 
Středa14:15 - 17:15praktická cvičeníImunochemical methods. 
Čtvrtek14:15 - 17:15praktická cvičeníImunochemical methods. 
15Pondělí14:15 - 15:45seminářCREDITGroup teachers
Úterý14:15 - 15:45seminářCREDITGroup teachers
Pátek14:15 - 15:45seminářCREDITGroup teachers
Rozpis blokový
Týden bloku Den Od - Do Typ výuky Téma Učitel Soubory Poznámka Hodnocení
1Pondělí14:15 - 15:45seminářREVISION TEST: Metabolism of saccharides, lipids, amino acids  
Úterý14:15 - 15:45seminářREVISION TEST: Metabolism of saccharides, lipids, amino acids  
14:15 - 17:15praktická cvičeníIntroduction to pre-analytics of laboratory examination (Practice of venipuncture on a model of arm) 
Středa14:15 - 17:15praktická cvičeníIntroduction to pre-analytics of laboratory examination (Practice of venipuncture on a model of arm) 
Čtvrtek14:15 - 17:15praktická cvičeníIntroduction to pre-analytics of laboratory examination (Practice of venipuncture on a model of arm) 
Pátek14:15 - 15:45seminářREVISION TEST: Metabolism of saccharides, lipids, amino acids  
2Pondělí14:15 - 15:45seminářIntroduction to the block of molecular biology prof. MUDr. Zdeněk Kleibl, Ph.D. 
Úterý14:15 - 15:45seminářIntroduction to the block of molecular biology prof. MUDr. Zdeněk Kleibl, Ph.D. 
14:15 - 15:45praktická cvičeníToxicology 
Středa14:15 - 15:45praktická cvičeníToxicology 
Čtvrtek14:15 - 15:45praktická cvičeníToxicology 
Pátek14:15 - 15:45seminářIntroduction to the block of molecular biology prof. MUDr. Zdeněk Kleibl, Ph.D. 
3Pondělí14:15 - 15:45seminářStructure of nucleic acids MUDr. Martin Leníček, Ph.D. 
Úterý14:15 - 15:45seminářStructure of nucleic acids MUDr. Martin Leníček, Ph.D. 
14:15 - 15:45praktická cvičeníIsolation of DNA from buccal smear. Measurement of concentration of isolated DNA. / Cell fractionation, isolation and purification of genetic material. Characterization and quantification of DNA. Properties of DNA/RNA.  
Středa14:15 - 15:45praktická cvičeníIsolation of DNA from buccal smear. Measurement of concentration of isolated DNA. / Cell fractionation, isolation and purification of genetic material. Characterization and quantification of DNA. Properties of DNA/RNA.  
Čtvrtek14:15 - 15:45praktická cvičeníIsolation of DNA from buccal smear. Measurement of concentration of isolated DNA. / Cell fractionation, isolation and purification of genetic material. Characterization and quantification of DNA. Properties of DNA/RNA.  
Pátek14:15 - 15:45seminářStructure of nucleic acidsMUDr. Martin Leníček, Ph.D. 
4Pondělí14:15 - 15:45seminářSelected methods of molecular biology RNDr. Markéta Šafaříková, Ph.D. 
Úterý14:15 - 15:45seminářSelected methods of molecular biology RNDr. Markéta Šafaříková, Ph.D. 
14:15 - 15:45praktická cvičeníElectroforesis of isolated DNA. Amplification of fragments including intron 10, exon 13 and exon 14 of DPYD gene by means of PCR. / PCR and its modification (RT-PCR, qPCR). 
Středa14:15 - 15:45praktická cvičeníElectroforesis of isolated DNA. Amplification of fragments including intron 10, exon 13 and exon 14 of DPYD gene by means of PCR. / PCR and its modification (RT-PCR, qPCR). 
Čtvrtek14:15 - 15:45praktická cvičeníElectroforesis of isolated DNA. Amplification of fragments including intron 10, exon 13 and exon 14 of DPYD gene by means of PCR. / PCR and its modification (RT-PCR, qPCR). 
Pátek14:15 - 15:45seminářSelected methods of molecular biology RNDr. Markéta Šafaříková, Ph.D. 
5Pondělí14:15 - 15:45seminářNext Generation Sequencing (NGS) RNDr. Markéta Šafaříková, Ph.D. 
Úterý14:15 - 15:45seminářNext Generation Sequencing (NGS) RNDr. Markéta Šafaříková, Ph.D. 
14:15 - 15:45praktická cvičeníElectroforesis of all PCR products. Restriction analysis of PCR products with intron 10 and exon 14 of DPYD gene. / Restriction enzymes and their usage (restriction analysis, DNA cloning). 
Středa14:15 - 15:45praktická cvičeníElectroforesis of all PCR products. Restriction analysis of PCR products with intron 10 and exon 14 of DPYD gene. / Restriction enzymes and their usage (restriction analysis, DNA cloning). 
Čtvrtek14:15 - 15:45praktická cvičeníElectroforesis of all PCR products. Restriction analysis of PCR products with intron 10 and exon 14 of DPYD gene. / Restriction enzymes and their usage (restriction analysis, DNA cloning). 
Pátek14:15 - 15:45seminářNext Generation Sequencing (NGS) RNDr. Markéta Šafaříková, Ph.D. 
6Pondělí14:15 - 15:45seminářRegulation of expression of genetic information at various levels, RNA interference, microRNA. Ing. Kateřina Žížalová, Ph.D. 
Úterý14:15 - 15:45seminářRegulation of expression of genetic information at various levels, RNA interference, microRNA. Ing. Kateřina Žížalová, Ph.D. 
14:15 - 15:45praktická cvičeníElectroforesis of restriction analysis. Preparation of sequencing reaction for DPYD exon 13. /Sanger's sequencing and evaluation of sequencing chromatograms.  
Středa14:15 - 15:45praktická cvičeníElectroforesis of restriction analysis. Preparation of sequencing reaction for DPYD exon 13. /Sanger's sequencing and evaluation of sequencing chromatograms.  
Čtvrtek14:15 - 15:45praktická cvičeníElectroforesis of restriction analysis. Preparation of sequencing reaction for DPYD exon 13. /Sanger's sequencing and evaluation of sequencing chromatograms.  
Pátek14:15 - 15:45seminářRegulation of expression of genetic information at various levels, RNA interference, microRNA.Ing. Kateřina Žížalová, Ph.D. 
7Pondělí14:15 - 15:45seminářAdvanced analytical methods (GC, HPLC, MS, MALDI) RNDr. Marek Vecka, Ph.D. 
Úterý14:15 - 15:45seminářAdvanced analytical methods (GC, HPLC, MS, MALDI) RNDr. Marek Vecka, Ph.D. 
14:15 - 15:45praktická cvičeníPrecipitation of sequencing reaction and preparation of Sanger's sequencing./ Significance of analysis DNA, RNA and proteins in diagnostics.  
Středa14:15 - 15:45praktická cvičeníPrecipitation of sequencing reaction and preparation of Sanger's sequencing./ Significance of analysis DNA, RNA and proteins in diagnostics.  
Čtvrtek14:15 - 15:45praktická cvičeníPrecipitation of sequencing reaction and preparation of Sanger's sequencing./ Significance of analysis DNA, RNA and proteins in diagnostics.  
Pátek14:15 - 15:45seminářAdvanced analytical methods (GC, HPLC, MS, MALDI) RNDr. Marek Vecka, Ph.D. 
8Pondělí14:15 - 15:45seminářRegulations of energetic metabolismMUDr. Jan Pláteník, Ph.D. 
Úterý14:15 - 15:45seminářRegulations of energetic metabolismMUDr. Jan Pláteník, Ph.D. 
14:15 - 15:45praktická cvičeníEvaluation of sequencing chromatograms and restriction analyses, relationship of found phenotypes to 5FU toxicity. REVISION TEST molecular biology  
Středa14:15 - 15:45praktická cvičeníEvaluation of sequencing chromatograms and restriction analyses, relationship of found phenotypes to 5FU toxicity. REVISION TEST molecular biology 
Pátek14:15 - 15:45nicEaster Holiday 
9Pondělí14:15 - 15:45nicEaster Holiday 
Čtvrtek14:15 - 15:45praktická cvičeníEvaluation of sequencing chromatograms and restriction analyses, relationship of found phenotypes to 5FU toxicity. REVISION TEST molecular biology 
Pátek14:15 - 15:45seminářRegulations of energetic metabolism MUDr. Jan Pláteník, Ph.D. 
10Pondělí14:15 - 15:45seminářMetabolism of ironIng. Martina Čierna 
Úterý14:15 - 15:45seminářMetabolism of ironIng. Martina Čierna 
14:15 - 15:45praktická cvičeníLiver, tetrapyrrols: GGT, total and direct bilirubin. Blood clotting. Cardiomarkers.  
Středa14:15 - 15:45praktická cvičeníLiver, tetrapyrrols: GGT, total and direct bilirubin. Blood clotting. Cardiomarkers.  
Čtvrtek14:15 - 15:45praktická cvičeníLiver, tetrapyrrols: GGT, total and direct bilirubin. Blood clotting. Cardiomarkers. Holiday
Pátek14:15 - 15:45seminářMetabolism of ironIng. Martina Čierna 
11Pondělí14:15 - 15:45seminářDiabetes mellitus and metabolic syndrome MUDr. Miloš Mráz, Ph.D. 
Úterý14:15 - 15:45seminářDiabetes mellitus and metabolic syndrome MUDr. Miloš Mráz, Ph.D. 
14:15 - 15:45praktická cvičeníExamination of urine (physical, chemical examination, urinary sediment)  
Středa14:15 - 15:45praktická cvičeníExamination of urine (physical, chemical examination, urinary sediment)  
Čtvrtek14:15 - 15:45praktická cvičeníExamination of urine (physical, chemical examination, urinary sediment) Holiday
Pátek14:15 - 15:45seminářDiabetes mellitus and metabolic syndrome MUDr. Miloš Mráz, Ph.D. 
12Pondělí14:15 - 15:45seminářTUTORIAL 4: Liver and metabolism  
Úterý14:15 - 15:45seminářTUTORIAL 4: Liver and metabolism Rector's Day
14:15 - 15:45praktická cvičeníExamination of renal function: Creatinin, uric acid. Sodium ions. Proteinuria: total proteinuria, evaluation of ELFO. Protein in cerebrospinal fluid. Rector's Day
Středa14:15 - 15:45praktická cvičeníExamination of renal function: Creatinin, uric acid. Sodium ions. Proteinuria: total proteinuria, evaluation of ELFO. Protein in cerebrospinal fluid.  
Čtvrtek14:15 - 15:45praktická cvičeníExamination of renal function: Creatinin, uric acid. Sodium ions. Proteinuria: total proteinuria, evaluation of ELFO. Protein in cerebrospinal fluid.  
Pátek14:15 - 15:45seminářTUTORIAL 4: Liver and metabolism  
13Pondělí14:15 - 15:45seminářDisorders of acid-base balance doc. MUDr. Helena Lahoda Brodská, Ph.D. 
Úterý14:15 - 15:45seminářDisorders of acid-base balance doc. MUDr. Helena Lahoda Brodská, Ph.D. 
14:15 - 15:45praktická cvičeníMetabolism of calcium and phosphorus, osteoporosis.  
Středa14:15 - 15:45praktická cvičeníMetabolism of calcium and phosphorus, osteoporosis.  
Čtvrtek14:15 - 15:45praktická cvičeníMetabolism of calcium and phosphorus, osteoporosis.  
Pátek14:15 - 15:45seminářDisorders of acid-base balance doc. MUDr. Helena Lahoda Brodská, Ph.D. 
14Pondělí14:15 - 15:45seminářConsultations/compensations for missed lessons  
Úterý14:15 - 15:45praktická cvičeníPractical Credit Examination  
14:15 - 15:45seminářConsultations/compensations for missed lessons  
Středa14:15 - 15:45praktická cvičeníPractical Credit Examination  
Čtvrtek14:15 - 15:45praktická cvičeníPractical Credit Examination  
Pátek14:15 - 15:45seminářConsultations/compensations for missed lessons  
15Pondělí14:15 - 15:45seminářCredit  
Úterý14:15 - 15:45seminářCredit  
Pátek14:15 - 15:45seminářCredit  
Rozpis semestrální
Výukový týden Datum Od - Do Typ výuky Téma Učitel Soubory Poznámka Hodnocení
130.09.202412:30 - 14:00přednáškaIntroduction to study of medical biochemistry. Basic terms. Dispersion systems.prof. Dr. Ing. Tomáš Navrátil, Ph.D. 
03.10.202412:30 - 14:00přednáškaAcids, bases, buffers.prof. Dr. Ing. Tomáš Navrátil, Ph.D. 
průměr: 5, hodnoceno: 1x
207.10.202412:30 - 14:00přednáška Activity. Dissociation. Ionic strength. Colloids. prof. Dr. Ing. Tomáš Navrátil, Ph.D. 
10.10.202412:30 - 14:00přednáškaEssentials of physical and analytical chemistry..MUDr. Martin Vejražka, Ph.D. 
314.10.202412:30 - 14:00přednáškaToxicologically important anorganic substances.prof. Dr. Ing. Tomáš Navrátil, Ph.D. 
17.10.202412:30 - 14:00přednáškaEssentials of organic chemistryMUDr. Adriana Rybnikářová 
421.10.202409:00 - 10:30přednáškaAmino acids. Peptides. Proteins.MUDr. Jan Pláteník, Ph.D. 
24.10.202412:30 - 14:00přednáškaEnzymes 1.Mgr. Jan Ševčík, Ph.D. 
528.10.202412:30 - 14:00přednáškaNational Holiday 
31.10.202412:30 - 14:00přednáškaEnzymes 2.Mgr. Jan Ševčík, Ph.D. 
604.11.202412:30 - 14:00přednáškaIntroduction to the cellular metabolism.RNDr. Markéta Janatová, Ph.D. 
07.11.202412:30 - 14:00přednáškaBiologic oxidation, respiratory chain, oxidative phosphorylation. MUDr. Jan Pláteník, Ph.D. 
711.11.202412:30 - 14:00přednáškaOxidative decarboxylation and Krebs cycle. RNDr. Markéta Janatová, Ph.D. 
14.11.202409:00 - 14:00přednáškaStructure, digestion, absorption and transport of saccharides.doc. MUDr. Lucie Muchová, Ph.D. 
průměr: 1, hodnoceno: 1x
818.11.202412:30 - 14:00přednáškaMetabolism of saccharides I.doc. MUDr. Lucie Muchová, Ph.D. 
21.11.202412:30 - 14:00přednáškaMetabolism of saccharides II.doc. MUDr. Lucie Muchová, Ph.D. 
925.11.202412:30 - 14:00přednáškaStructure, digestion, and absorption of lipids. RNDr. Marek Vecka, Ph.D. 
28.11.202412:30 - 14:00přednáškaMetabolism of fatty acids and triacylglycerols.doc. MUDr. Evžen Křepela, CSc. 
1002.12.202412:30 - 14:00přednáškaLipid mediators. Metabolism of glycerolipids and sfingolipids. RNDr. Marek Vecka, Ph.D. 
05.12.202412:30 - 14:00přednáškaSteroidsRNDr. Marek Vecka, Ph.D. 
1109.12.202412:30 - 14:00přednáškaMetabolism of amino acids, the urea cycle. doc. MUDr. Jiří Vachtenheim, CSc. 
12.12.202412:30 - 14:00přednáškaCatabolism of amino acids and their carbon skeletons.doc. MUDr. Jiří Vachtenheim, CSc. 
1216.12.202412:30 - 14:00přednáškaConversion of amino acids to biologically active derivatives. MUDr. Jan Krtil 
1309.01.202512:30 - 14:00přednáškaMetabolism of porphyrins. doc. MUDr. Evžen Křepela, CSc. 
1409.01.202512:30 - 14:00přednáškaMetabolism of purines and pyrimidines doc. MUDr. Evžen Křepela, CSc. 
1517.01.202512:30 - 14:00přednáškaConsultations  
Rozpis semestrální
Výukový týden Datum Od - Do Typ výuky Téma Učitel Soubory Poznámka Hodnocení
126.02.202510:45 - 12:15přednáškaIntroductory lecture to the molecular biology block. prof. MUDr. Zdeněk Kleibl, Ph.D. 
27.02.202512:30 - 14:00přednáškaNucleic acids: Structure, properties and significance. Levels in DNA & RNA structure. Organization of nuclear DNA, histones. Principles of DNA-protein interaction. doc. MUDr. Jiří Vachtenheim, CSc. 
205.03.202510:45 - 12:15přednáškaDNA replication. Pro- and eukaryotic DNA polymerases. Types and classifications of DNA alterations. Mgr. Jan Ševčík, Ph.D. 
06.03.202512:30 - 14:00přednáškaDNA repair. DNA reparation pathways. Direct repair, BER, NER, MMR, repair of DNA strand breaks. Mgr. Jan Ševčík, Ph.D. 
312.03.202510:45 - 12:15přednáškaBiosynthesis of RNA (DNA transcription) in prokaryotic and eukaryotic cells. Posttranscriptional RNA processing. Splicing and export of RNA from the cell nucleus. Participation of histone modification in transcriptional regulation. doc. MUDr. Jiří Vachtenheim, CSc. 
13.03.202512:30 - 14:00přednáškaRegulation of gene expression in pro- and eukaryotic cells at the level of transcription. prof. MUDr. Zdeněk Kleibl, Ph.D. 
419.03.202510:45 - 12:15přednáškaSynthesis of proteins (translation) and its regulation. RNDr. Jana Soukupová, Ph.D. 
20.03.202512:30 - 14:00přednáškaPost-translational protein modifications. Cellular protein targetting. doc. MUDr. Evžen Křepela, CSc. 
526.03.202510:45 - 12:15přednáškaIntracellular protein degradation: role of lysosomes and proteasomes. doc. MUDr. Evžen Křepela, CSc. 
27.03.202512:30 - 14:00přednáškaStructure and function of biomembranes, cellular junctions. RNDr. Marek Vecka, Ph.D. 
602.04.202510:45 - 12:15přednáškaMechanisms of cellular signaling and hormone actions I MUDr. Jan Pláteník, Ph.D. 
03.04.202512:30 - 14:00přednáškaMechanisms of cellular signaling and hormone actions II MUDr. Jan Pláteník, Ph.D. 
709.04.202510:45 - 12:15přednáškaThe cell cycle. Molecular basis of tumor growth. doc. MUDr. Jiří Vachtenheim, CSc. 
10.04.202512:30 - 14:00přednáškaPrograms of cellular senescence and cellular death. MUDr. Jan Pláteník, Ph.D. 
816.04.202510:45 - 12:15přednáškaLecture cancelled  
17.04.202512:30 - 14:00přednáškaDean's Day 
923.04.202510:45 - 12:15přednáškaIntroduction to organ biochemistry. Metabolism of liver, starvation, obesity. MUDr. Jan Krtil 
24.04.202512:30 - 14:00přednáška Vitamins, nutrition and nutritional supplements. RNDr. Aleš Dvořák, Ph.D. 
1030.04.202510:45 - 12:15přednáškaBlood clotting. Specific features of red blood cell metabolism.MUDr. Jan Krtil 
01.05.202512:30 - 14:00přednáškaNational Holiday  
1107.05.202510:45 - 12:15přednáškaMetabolism of the kidney. MUDr. Jan Krtil 
08.05.202512:30 - 14:00přednáškaNational Holiday  
1214.05.202510:45 - 12:15přednáškaXenobiochemistry RNDr. Marek Vecka, Ph.D. 
15.05.202512:30 - 14:00přednáška Biochemistry of muscle contraction. Extracellular matrix (proteoglycans, collagen, elastin). doc. MUDr. Evžen Křepela, CSc. 
1321.05.202510:45 - 12:15přednáškaCellular and humoral immunity. Structure of antibodies, interaction with antigen, origin of heterogenity.Mgr. Libuše Nosková, Ph.D. 
22.05.202512:30 - 14:00přednáškaBiochemistry of neurotransmission and sensory organs I.MUDr. Jan Pláteník, Ph.D. 
1428.05.202510:45 - 12:15přednáškaBiochemistry of neurotransmission and sensory organs II. MUDr. Jan Pláteník, Ph.D. 
29.05.202512:30 - 14:00přednáškaReactive oxygen and nitrogen species prof. MUDr. Tomáš Zima, DrSc., MBA 
 
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