SubjectsSubjects(version: 978)
Course, academic year 2025/2026
   
Seminar in theoretical biology - MS720S25Z
Title: Seminář z teoretické biologie
Czech title: Seminář z teoretické biologie
Guaranteed by: Department of Philosophy and History of Science (31-107)
Faculty: Faculty of Science
Actual: from 2025
Semester: both
E-Credits: 2
Hours per week, examination: 0/2, C [HT]
Capacity: unlimited
Min. number of students: unlimited
4EU+: no
Virtual mobility / capacity: no
State of the course: taught
Language: Czech
Note: you can enroll for the course repeatedly
enabled for web enrollment
priority enrollment if the course is part of the study plan
you can enroll for the course in winter and in summer semester
Guarantor: prof. Mgr. Karel Kleisner, Ph.D.
Mgr. Jana Švorcová, Ph.D.
Teacher(s): Mgr. Jindřich Brejcha, Ph.D.
doc. RNDr. Šárka Kaňková, Ph.D.
prof. Mgr. Karel Kleisner, Ph.D.
doc. RNDr. Anton Markoš, CSc.
Mgr. Jana Švorcová, Ph.D.
Mgr. Jan Toman, Ph.D.
Mgr. Petr Tureček, Ph.D.
Annotation -
The Theoretical Biology Seminar is primarily a meeting place for students of the Master's and Doctoral programmes in Theoretical and Evolutionary Biology. It is also compulsory for these students. However, students of other biological or natural science disciplines are also welcome to attend the seminar, as well as, for example, students of philosophy, mathematics and statistics interested in living systems.

The aim of the seminar is to identify and clarify the basic concepts of theoretical biology and to learn heuristic and methodological techniques and approaches applied in conceptualizing key characteristics of life and its evolution.

The seminar will also address the practical problems that students face in writing their first-publication papers. Thus, the seminar in theoretical biology in general offers a platform for discussing current theoretical and methodological issues in the research work of individual participants. Occasionally, the seminar will also feature guest presentations that touch on recent discoveries and future perspectives in theoretical and evolutionary biology and related fields.
The seminar also focuses on an active exchange of experiences, discussions on aspects of individual PhD projects and information on current developments in the field. The format, course and structure of the seminar is modified according to the current state of the field and by agreement between the seminar chair and the respective students. The active participation of PhD students is expected (papers, lectures, etc.). The seminar is conducted in English if there is a foreigner among the students.

The seminar programme is adjusted each semester, with student presentations usually alternating with those of invited guests.
Last update: Švorcová Jana, Mgr., Ph.D. (10.05.2023)
Syllabus - Czech

Na semináři se většinou střídají prezentace studentů magisterského a doktorského studia o pokroku na jejich práci s prezentacemi zvaných hostů nebo vyučujících. Program semináře je upřesňován vždy na začátku semestru, každý týden jsou posílány pozvánky. Pokud by někdo chtěl být zahrnutý v mail listu, prosím o email na jana.svorcova@natur.cuni.cz

Program na zimní semestr 2023 bude zveřejněn na začátku října.

Last update: Švorcová Jana, Mgr., Ph.D. (10.05.2023)
Learning outcomes

Theoretical Biology Seminar – Learning Outcomes

The student is able to:

  • Navigate contemporary theoretical approaches in biology and situate the topics discussed within broader concepts of biological organization, evolution, and knowledge.

  • Critically analyze and interpret scholarly presentations (both student and invited speakers) with respect to their theoretical foundations, methodological assumptions, and implications for biological theory.

  • Formulate, structure, and defend their own research problem (particularly in the context of a doctoral dissertation) using the concepts, frameworks, and argumentative tools of theoretical biology.

  • Reflect on the relationship between empirical research and theory, distinguish between data, models, metaphors, and interpretative frameworks, and assess their heuristic value.

  • Conduct scholarly discussions grounded in argumentation, respect the plurality of theoretical approaches, and identify their strengths and limitations.

  • Integrate disparate biological perspectives (e.g., evolutionary, developmental, systems, ecological, semiotic, psychological) into a coherent interpretative framework.

  • Apply key principles of theoretical biology (organization, function, individuality, autonomy, plasticity, communication) to specific biological problems presented in the seminar.

  • Critically evaluate the epistemological and ontological assumptions of biological knowledge and reflect on the role of theoretical models in the construction of biological reality.

  • Recognize the limits of applicability of individual theories and models and discuss possible alternatives or extensions.

  • Develop academic competencies essential for doctoral research, including the presentation of scholarly topics, providing constructive feedback, formulating questions, and engaging in rigorous scientific argumentation.

Last update: Švorcová Jana, Mgr., Ph.D. (19.01.2026)
 
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