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Course, academic year 2023/2024
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Practical course of molecular phylogenetics - MB160C21
Title: Praktikum z molekulární fylogenetiky
Czech title: Praktikum z molekulární fylogenetiky
Guaranteed by: Department of Parasitology (31-161)
Faculty: Faculty of Science
Actual: from 2023 to 2023
Semester: winter
E-Credits: 1
Examination process: winter s.:
Hours per week, examination: winter s.:0/22, C [HS]
Capacity: 24
Min. number of students: unlimited
4EU+: no
Virtual mobility / capacity: no
State of the course: taught
Language: English
Additional information: http://web.natur.cuni.cz/~vlada/moltax/
Note: enabled for web enrollment
Guarantor: doc. Mgr. Vladimír Hampl, Ph.D.
Teacher(s): doc. Mgr. Vladimír Hampl, Ph.D.
Mgr. Jiří Novák
Annotation -
Annotation - Application of molecular biology techniques in taxonomy, epidemiology, forensic medicine, evolutionary biology, sociobiology. Basic laboratory techniques, sequencing, molecular fingerprinting, DNA hybridization, allozyme analysis, immunological techniques. Genetic distances, construction of phylogenetic trees, analysis of statistical support for the trees. See also http://web.natur.cuni.cz/~vlada/moltax/.
Last update: Hampl Vladimír, doc. Mgr., Ph.D. (10.02.2010)
Literature - Czech

Felsenstein J: Inferring phylogenies. Sinauer Associates, Inc., USA, 2004

Hillis DM, Moritz C a Mable BK: Molecular Systematics, second edition. Sinauer Associates, Inc., USA, 1996

Avise JC. Molecular Markers, Natural History and Evolution, second edition. Sinauer Associates, Inc., USA, 2004

Last update: Hampl Vladimír, doc. Mgr., Ph.D. (04.08.2011)
Requirements to the exam - Czech

Odevzdání samostatně vyřešené úlohy.

Last update: Hampl Vladimír, doc. Mgr., Ph.D. (16.12.2011)
Syllabus - Czech

Practicals will be held in room 311 (V7) on Thursdays at 14:50.

23. 11. – Database searches, sequence formats, alignment

30. 11. – Trees from the DNA sequences

7. 12. – Trees from amino acid sequences

14. 12. – Bayesian methods, molecular dating

21. 12. – Metabarcoding

Last update: Hampl Vladimír, doc. Mgr., Ph.D. (24.09.2023)
 
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